Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7293494 chr5:46313652 T/G LOC647121 chr1:121260910-121313686:+ -0.37 -8 9.45E-15 Box Plot
THCA rs72935340 chr11:78857837 G/A ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935341 chr11:78858125 G/C ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935342 chr11:78858612 G/A ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935344 chr11:78858742 A/G ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935345 chr11:78858988 G/A ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935346 chr11:78859215 T/C ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs72935353 chr11:78862727 C/T ICAM3 chr19:10444452-10450499:- -0.41 -6.47 2.49E-10 Box Plot
THCA rs72935357 chr11:78864080 G/A ICAM3 chr19:10444452-10450499:- -0.41 -6.47 2.49E-10 Box Plot
THCA rs72935363 chr11:78866235 G/A ICAM3 chr19:10444452-10450499:- -0.4 -5.97 4.59E-9 Box Plot
THCA rs72936081 chr1:18367428 G/A CYTSB chr17:19912614-20218065:+ -0.23 -5.99 4.2E-9 Box Plot
THCA rs72936084 chr1:18367616 A/G CYTSB chr17:19912614-20218065:+ -0.22 -5.9 6.87E-9 Box Plot
THCA rs72939500 chr11:77671217 A/G INTS4L1 chr7:64601603-64694600:+ 0.71 11.35 1.37E-26 Box Plot
THCA rs72941332 chr11:77685936 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 10.89 8.03E-25 Box Plot
THCA rs72941339 chr11:77688940 T/G INTS4L1 chr7:64601603-64694600:+ 0.7 11.24 3.67E-26 Box Plot